Cyanobacteria

Cyanobacteria

Cyanobacteria

A slimy mat-forming photosynthetic bacteria commonly mistaken for algae in freshwater aquariums.

Save this algae profile for quick reference.

Quick facts

Category
Cyanobacteria
Organism group
Cyanobacteria
Growth form
Slime
Primary color
Blue Green
Secondary color
Dark Green
Attachment
Moderate
Removal difficulty
Hard

Identification

Blue-green, dark green, or blackish slimy sheets that can spread quickly across substrate, glass, plants, and hardscape.

  • Growth form: Slime
  • Primary color: Blue Green
  • Secondary color: Dark Green

Looks like: Easy to distinguish from most true algae because it forms slippery sheets and often has a strong foul smell.

Where it appears

Typical affected areas

  • On Substrate
  • On Plants
  • On Hardscape
  • On Glass

Common contexts

  • Low Flow
  • Nutrient Imbalance

Causes

Cyanobacteria commonly takes hold in stagnant, dirty, or otherwise unstable areas where sheets can spread quickly.

Most common triggers

  • Stagnant Or Low Flow Zones
  • Organic Buildup
  • General Instability

Root cause note: Although hobbyists call it algae, cyanobacteria is biologically bacteria, which is why it behaves differently from many true algae problems.

Nutrient relevance

Balance relevance: High

Related nutrient issues

  • Imbalanced Nutrients
  • Organic Loading

Cyanobacteria often reflects poor circulation and accumulated organics as much as nutrient chemistry itself.

Correction hint: Improve flow and hygiene first, then reassess nutrient balance rather than treating it as a simple plant fertilizer issue.

Treatment

Quick action: Siphon out the mats, clean the affected zone, and improve circulation immediately.

Physical removal plus correcting dead spots and instability is the core fix; severe cases sometimes need last-resort treatment.

Manual removal: Lift and siphon the mats carefully so they do not spread and settle elsewhere.

Difficulty: Hard

Prevention

Good circulation, cleaner substrate zones, and overall stability greatly reduce repeat outbreaks.

This page is designed to help with visual identification first, then causes, treatment, and prevention. Actual algae pressure can vary depending on maintenance, livestock, plant mass, light, flow, and nutrient consistency.